Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1183
Gene Symbol: CLCN4
CLCN4
0.010 GeneticVariation disease BEFREE X-linked mental retardation with neonatal hypotonia in a French family (MRX15): gene assignment to Xp11.22-Xp21.1. 8826458 1996
Entrez Id: 9581
Gene Symbol: PREPL
PREPL
0.020 GeneticVariation disease BEFREE With the reports on genomic deletions including at least both SLC3A1 and the neighboured PREPL gene the spectrum of cystinuria mutations and of clinical symptoms could recently be enlarged: patients homozygous for these deletions suffer from a general neonatal hypotonia and growth retardation in addition to cystinuria. 22766003 2012
Entrez Id: 6519
Gene Symbol: SLC3A1
SLC3A1
0.010 GeneticVariation disease BEFREE With the reports on genomic deletions including at least both SLC3A1 and the neighboured PREPL gene the spectrum of cystinuria mutations and of clinical symptoms could recently be enlarged: patients homozygous for these deletions suffer from a general neonatal hypotonia and growth retardation in addition to cystinuria. 22766003 2012
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.010 Biomarker disease BEFREE We report on a boy with congenital pure red blood cell aplasia [Diamond Blackfan anemia (DBA)] and severe congenital hypotonia, macrocephaly, hypertelorism, a broad and tall forehead, medial epicanthus, and facial hypotonia with mouth-breathing and drooling, an affable and out-going personality, and a general psychomotor retardation. 10450869 1999
Entrez Id: 58
Gene Symbol: ACTA1
ACTA1
0.010 GeneticVariation disease BEFREE We conclude that mutations in ACTA1 can cause pathologic features consistent with myofibrillar myopathy, and mutations in ACTA1 should be considered in patients with severe congenital hypotonia associated with muscle weakness and features of myofibrillar myopathy. 25913210 2015
Entrez Id: 8506
Gene Symbol: CNTNAP1
CNTNAP1
0.010 GeneticVariation disease BEFREE Two novel variants in CNTNAP1 in two siblings presenting with congenital hypotonia and hypomyelinating neuropathy. 27782105 2017
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 GeneticVariation disease BEFREE To distinguish this subset of affected individuals from the DRPLA diagnosis, we suggest using the term CHEDDA (congenital hypotonia, epilepsy, developmental delay, digit abnormalities) to classify the condition. 30827498 2019
Entrez Id: 9997
Gene Symbol: SCO2
SCO2
0.010 GeneticVariation disease BEFREE This case provides strong support that SCO2 mutations can result in neonatal hypotonia with an SMA 1 phenotype. 14994243 2004
Entrez Id: 2632
Gene Symbol: GBE1
GBE1
0.010 Biomarker disease BEFREE This case confirms previous observations that GBE deficiency ought to be included in the differential diagnosis of congenital hypotonia and that the phenotype correlates with the 'molecular severity' of the mutation. 20833045 2010
Entrez Id: 93627
Gene Symbol: TBCK
TBCK
0.020 GeneticVariation disease BEFREE The neurological phenotype of children with TBCK p.R126X mutations, which we call TBCK-encephaloneuronopathy (TBCKE), include congenital hypotonia, progressive motor neuronopathy, leukoencephalopathy, and epilepsy. 29283439 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE So far, biallelic NALCN and UNC80 variants have been described in a small number of individuals leading to infantile hypotonia, psychomotor retardation, and characteristic facies 1 (IHPRF1, OMIM 615419) and 2 (IHPRF2, OMIM 616801), respectively. 30167850 2018
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.010 Biomarker disease BEFREE Potocki-Lupski syndrome (PTLS, OMIM: 610883) is a microduplication syndrome characterized by infantile hypotonia, failure to thrive, cardiovascular malformations, developmental delay, intellectual disability, and behavior abnormalities, the latter of which can include autism spectrum disorder. 24311450 2014
Entrez Id: 54551
Gene Symbol: MAGEL2
MAGEL2
0.010 GeneticVariation disease BEFREE Patients with MAGEL2 variants shared several features with PWS, such as neonatal hypotonia, poor suck, and obesity; however, there were also unique features, including arthrogryposis and a failure to acquire meaningful words. 31791363 2019
Entrez Id: 51305
Gene Symbol: KCNK9
KCNK9
0.010 Biomarker disease BEFREE Patients with KCNK9 imprinting syndrome demonstrate congenital hypotonia, variable cleft palate, normal MRIs and EEGs, delayed development, and feeding problems. 27151206 2016
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE Patient 2 was compound heterozygous for two novel mutations, c.3226C>T (p.Arg1076Ter) and c.3205C>T (p.Arg1069Ter), in UNC80, a known gene of infantile hypotonia with psychomotor retardation and characteristic facies-2 (IHPRF2). 30771478 2019
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.140 GeneticVariation disease BEFREE Male patients with large duplications of the methyl CpG-binding protein 2 (MECP2) gene have been identified with a characteristic phenotype consisting of infantile hypotonia replaced by spasticity, developmental delay, severe mental retardation and recurrent respiratory infections. 21821449 2012
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Loss-of-function mutations of NALCN cause infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF). 26708751 2016
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 Biomarker disease BEFREE Loss-of function mutations in NALCN on chromosome 13q, a sodium leak channel that maintains baseline neuronal excitability, cause infantile hypotonia with psychomotor retardation and characteristic faces 1 (IHPRF1, OMIM #615419). 29168298 2018
Entrez Id: 285175
Gene Symbol: UNC80
UNC80
0.040 GeneticVariation disease BEFREE In this study, we report on a novel homozygous mutation in UNC80 in a Palestinian-Emirati patient suffering infantile hypotonia with psychomotor retardation and characteristic facies. 29430593 2018
Entrez Id: 259232
Gene Symbol: NALCN
NALCN
0.050 GeneticVariation disease BEFREE Importantly, NALCN mutations lead to complex neurodevelopmental syndromes, including infantile hypotonia with psychomotor retardation and characteristic facies (IHPRF) and congenital contractures of limbs and face, hypotonia and developmental delay (CLIFAHDD), which are recessively and dominantly inherited, respectively. 31409833 2019
Entrez Id: 3141
Gene Symbol: HLCS
HLCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013
Entrez Id: 54205
Gene Symbol: CYCS
CYCS
0.010 Biomarker disease BEFREE Hypotonia-cystinuria syndrome (HCS, OMIM606407) is characterized by infantile hypotonia, poor feeding, and growth hormone deficiency. 23794250 2013
Entrez Id: 246329
Gene Symbol: STAC3
STAC3
0.010 GeneticVariation disease BEFREE Horstick et al.(2013) previously reported a homozygous p.Trp284Ser variant in STAC3 as the cause of Native American myopathy (NAM) in 5 Lumbee Native American families with congenital hypotonia and weakness, cleft palate, short stature, ptosis, kyphoscoliosis, talipes deformities, and susceptibility to malignant hyperthermia (MH). 28777491 2017
Entrez Id: 9581
Gene Symbol: PREPL
PREPL
0.020 GeneticVariation disease BEFREE Homozygous or compound heterozygous loss of PREPL is predicted to cause neonatal hypotonia and severe feeding problems. 21222627 2011